BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B06LP1|AL425810
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1657 1512 0.0
>3x_Contig1657
Length = 14558
Score = 1512 bits (760), Expect = 0.0
Identities = 787/796 (98%), Gaps = 2/796 (0%)
Strand = Plus / Minus
Query: 1 actaagcttaactaaaactgtggcttcaagtaggatttttttagctcagcgttccaagga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5543 actaagcttaactaaaagtgtggcttcaagtaggatttttttagctcagcgttccaagga 5484
Query: 61 atttttttcttgtttcgtcattgtgtgcattttcttttgacggctgaaacgatacctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5483 atttttttcttgtttcgtcattgtgtgcattttcttttgacggctgaaacgatacctgcc 5424
Query: 121 ggaaagactgtcaaaaaccagcgtcagaataggtaggcgccattggcatcggcttgaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 ggaaagactgtcaaaaaccagcgtcagaataggtaggcgccattggcatcggcttgaacg 5364
Query: 181 tccatcagaaagacaaatgcagggacgacaagagacaagacacagcatactgaataatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 tccatcagaaagacaaatgcagggacgacaagagacaagacacagcatactgaataatga 5304
Query: 241 tgaatttttaaccaagtttttccatagaattgtggttattatgtaattctgttttgtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 tgaatttttaaccaagtttttccatagaattgtggttattatgtaattctgttttgtaat 5244
Query: 301 atacgtattttacagatcttcctcagactccgtatcgataaggtcgatgttcaggatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5243 atacgtattttacagatcttcctcagactccgtatcgataaggtcgatgttcaggatctt 5184
Query: 361 tattcccgcyttgttggggttaataatttcacgatcctctttttgttcaatacccsattc 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5183 tattcccgctttgttggggttaataatttcacgatcctctttttgttcaatacccgattc 5124
Query: 421 atttgtttgttcttgtagtagcgcagatattaggtctctcataggaccytctgtgcgttg 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5123 atttgtttgttcttgtagtagcgcagatattaggtctctcataggaccttctgtgcgttg 5064
Query: 481 acgtttgtttagaaacctgtcgagggtatttttctgtggggatagggatcttcctcsagt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5063 acgtttgtttagaaacctgtcgagggtatttttctgtggggatagggatcttcctcgagt 5004
Query: 541 cttttttggcgaagacttctttgatgatagccgcagagcttggcttgtctttgcgcgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5003 cttttttggcgaagacttctttgatgatagccgcagagcttggcttgtctttgcg-gcag 4945
Query: 601 ccatttctttatccaggtgtataagccatgatttcggaattactccagttggtatccaca 660
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4944 ctatttctttatccaggtgtataagcaatgatttcggaattactccagttggtatccaca 4885
Query: 661 tgtaatatgggtatttctgccttagaatggtagatttagcaggtgattttcgcggcgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4884 tgtaatatgggtatttctgccttagaatggtagatttagcaggtgattttcgcggcgagt 4825
Query: 721 tagcagagtcaatctttgcaaatcgtgccctgcttggcaattcagcgttttgtaatttag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4824 tagcagagtcaatctttgcaaatcgtgccctgcttggcaattcagcgttttgtaatttag 4765
Query: 781 gagt-ccttcaacttc 795
|||| |||||||||||
Sbjct: 4764 gagtcccttcaacttc 4749
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5564
Number of Sequences: 1807
Number of extensions: 5564
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)